Reconstructing phosphorylation signalling networks from quantitative phosphoproteomic data

نویسندگان
چکیده

برای دانلود رایگان متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Directional and quantitative phosphorylation networks.

Directionality in protein signalling networks is due to modulated protein-protein interactions and is fundamental for proper signal progression and response to external and internal cues. This property is in part enabled by linear motifs embedding post-translational modification sites. These serve as recognition sites, guiding phosphorylation by kinases and subsequent binding of modular domains...

متن کامل

Reconstructing dynamic gene regulatory networks from sample-based transcriptional data

The current method for reconstructing gene regulatory networks faces a dilemma concerning the study of bio-medical problems. On the one hand, static approaches assume that genes are expressed in a steady state and thus cannot exploit and describe the dynamic patterns of an evolving process. On the other hand, approaches that can describe the dynamical behaviours require time-course data, which ...

متن کامل

Reconstructing weighted networks from dynamics.

We present a method that reconstructs both the links and their relative coupling strength of bidirectional weighted networks. Our method requires only measurements of node dynamics as input. Using several examples, we demonstrate that our method can give accurate results for weighted random and weighted scale-free networks with both linear and nonlinear dynamics.

متن کامل

Quantitative phosphoproteomic profiling of PINK1-deficient cells identifies phosphorylation changes in nuclear proteins.

The Parkinson's disease (PD) associated gene PINK1 encodes a protein kinase that mediates the phosphorylation of multiple proteins involved in mitochondrial homeostasis. The broader downstream signaling events mediated by PINK1 kinase activity have not been well documented. We combine quantitative phosphoproteomic strategies with siRNA mediated PINK1 knock down in mammalian cells to identify al...

متن کامل

Reconstructing Social Networks from Emails

The article provides a brief overview of Social Network Analysis (SNA) and its potential for exploiting the wealth of information buried in the email archives of business and private entities. Within the scope of the COMMIUS1 project, we built a proof-of-concept prototype in Java, which used the spreading activation algorithm to reconstruct various aspects of multidimensional social network fro...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

ژورنال

عنوان ژورنال: Essays in Biochemistry

سال: 2018

ISSN: 0071-1365,1744-1358

DOI: 10.1042/ebc20180019